STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_1527cheW-like domain protein; Identified by match to protein family HMM PF01584. (238 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA; Identified by similarity to GP:3493635; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.
 
 0.993
cheB
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.989
cheV
Chemotaxis protein CheV; Identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584.
 
 0.987
CPS_1528
Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584.
 
 
 0.986
cheZ
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
  
 0.942
CPS_3578
Response regulator; Identified by similarity to OMNI:SO0570; match to protein family HMM PF00072.
 
  
 0.935
CPS_3929
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM TIGR00229.
 
 0.926
CPS_1526
Identified by match to protein family HMM PF01656.
 
 
 0.915
cheY
Chemotaxis protein CheY; Identified by similarity to SP:Q51455; match to protein family HMM PF00072.
 
 0.905
CPS_4528
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.
 
 0.905
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.