Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_1753 | CPS_2775 | CPS_1753 | CPS_2775 | Identified by match to protein family HMM PF00860. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.541 |
| CPS_1753 | apt | CPS_1753 | CPS_3745 | Identified by match to protein family HMM PF00860. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.526 |
| CPS_1753 | guaA | CPS_1753 | CPS_4241 | Identified by match to protein family HMM PF00860. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.455 |
| CPS_1753 | hpt | CPS_1753 | CPS_1752 | Identified by match to protein family HMM PF00860. | Hypoxanthine phosphoribosyltransferase; Identified by similarity to SP:P36766; match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.557 |
| CPS_1753 | pbuX | CPS_1753 | CPS_2522 | Identified by match to protein family HMM PF00860. | Xanthine permease; Identified by similarity to SP:P42086; match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.558 |
| CPS_1753 | purD | CPS_1753 | CPS_0555 | Identified by match to protein family HMM PF00860. | Phosphoribosylamine--glycine ligase; Identified by similarity to SP:P15640; match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family. | 0.443 |
| CPS_1753 | purE | CPS_1753 | CPS_0026 | Identified by match to protein family HMM PF00860. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.436 |
| CPS_1753 | purK | CPS_1753 | CPS_0025 | Identified by match to protein family HMM PF00860. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.429 |
| CPS_1753 | purL | CPS_1753 | CPS_3675 | Identified by match to protein family HMM PF00860. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.815 |
| CPS_1753 | uraA | CPS_1753 | CPS_4318 | Identified by match to protein family HMM PF00860. | Uracil permease; Identified by similarity to SP:P33780; match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.598 |
| CPS_2775 | CPS_1753 | CPS_2775 | CPS_1753 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Identified by match to protein family HMM PF00860. | 0.541 |
| apt | CPS_1753 | CPS_3745 | CPS_1753 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Identified by match to protein family HMM PF00860. | 0.526 |
| apt | guaA | CPS_3745 | CPS_4241 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.993 |
| apt | hpt | CPS_3745 | CPS_1752 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Identified by similarity to SP:P36766; match to protein family HMM PF00156; match to protein family HMM TIGR01203; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.938 |
| apt | pbuX | CPS_3745 | CPS_2522 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Xanthine permease; Identified by similarity to SP:P42086; match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.431 |
| apt | purD | CPS_3745 | CPS_0555 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylamine--glycine ligase; Identified by similarity to SP:P15640; match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; Belongs to the GARS family. | 0.448 |
| apt | purE | CPS_3745 | CPS_0026 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.554 |
| apt | purK | CPS_3745 | CPS_0025 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.560 |
| apt | purL | CPS_3745 | CPS_3675 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.776 |
| apt | uraA | CPS_3745 | CPS_4318 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Uracil permease; Identified by similarity to SP:P33780; match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.431 |
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