Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hupB1 | ihfA | CPS_1873 | CPS_2994 | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.583 |
| hupB1 | pheA | CPS_1873 | CPS_1221 | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | 0.439 |
| hupB1 | rpsT | CPS_1873 | CPS_1179 | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.470 |
| hupB1 | tyrA | CPS_1873 | CPS_3953 | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | 0.414 |
| ihfA | hupB1 | CPS_2994 | CPS_1873 | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.583 |
| ihfA | pheA | CPS_2994 | CPS_1221 | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | 0.439 |
| ihfA | rpsT | CPS_2994 | CPS_1179 | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.470 |
| ihfA | tyrA | CPS_2994 | CPS_3953 | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | 0.414 |
| pheA | hupB1 | CPS_1221 | CPS_1873 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.439 |
| pheA | ihfA | CPS_1221 | CPS_2994 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.439 |
| pheA | tyrA | CPS_1221 | CPS_3953 | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | 0.998 |
| rpsT | hupB1 | CPS_1179 | CPS_1873 | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.470 |
| rpsT | ihfA | CPS_1179 | CPS_2994 | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.470 |
| tyrA | hupB1 | CPS_3953 | CPS_1873 | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | DNA-binding protein, HU family; Identified by match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.414 |
| tyrA | ihfA | CPS_3953 | CPS_2994 | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.414 |
| tyrA | pheA | CPS_3953 | CPS_1221 | Chorismate mutase/prephenate dehydrogenase; Identified by similarity to SP:P07023; match to protein family HMM PF01817; match to protein family HMM PF02153; match to protein family HMM TIGR01799. | Chorismate mutase/prephenate dehydratase; Identified by similarity to SP:Q02286; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01797. | 0.998 |