STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_2006Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family. (160 aa)    
Predicted Functional Partners:
CPS_4355
Identified by match to protein family HMM PF00462; match to protein family HMM PF00578.
  
 0.959
gor
Glutathione reductase; Identified by similarity to SP:P06715; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01421.
  
 0.933
gshB
Glutathione synthetase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.929
CPS_0141
Antioxidant, AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.926
CPS_1910
Identified by similarity to SP:P32105; match to protein family HMM PF02798.
  
 
 0.918
ggt1
Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
     
 0.914
ggt2
Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
     
 0.914
CPS_2436
Putative glutathione S-transferase; Identified by similarity to GP:3891593; match to protein family HMM PF02798; Belongs to the GST superfamily.
   
 
 0.913
CPS_2673
Putative glutathione S-transferase; Identified by similarity to SP:P39100; match to protein family HMM PF02798; Belongs to the GST superfamily.
   
 
 0.910
CPS_2749
Putative glutathione S-transferase; Identified by similarity to SP:P39100; match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.
   
 
 0.910
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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