STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_2154Hydrolase, alpha/beta hydrolase fold family; Identified by match to protein family HMM PF00561. (308 aa)    
Predicted Functional Partners:
CPS_2155
Identified by match to protein family HMM PF00501.
 
 
 0.993
CPS_2153
3-oxoacyl-(acyl carrier protein) synthase III, homolog; Identified by similarity to GP:15488029.
 
  
 0.955
CPS_2156
3-beta hydroxysteroid dehydrogenase/isomerase family protein; Identified by similarity to SP:Q15738; match to protein family HMM PF01073; match to protein family HMM PF07993.
 
 
 0.915
pfaA
Polyunsaturated fatty acid synthase PfaA; Identified by similarity to GP:6691654; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
 
 0.806
pfaC
Polyunsaturated fatty acid synthase PfaC; Identified by similarity to GP:6691656; match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM PF07977; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.725
pfaD
Polyunsaturated fatty acid synthase PfaD; Identified by similarity to GP:6691657.
 
    0.698
CPS_2157
Thioesterase family protein; Identified by similarity to GP:6691653; match to protein family HMM PF03061.
 
   
 0.590
apaH
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.516
pfaB
Polyunsaturated fatty acid synthase PfaB; Identified by similarity to GP:6691655; match to protein family HMM PF02801.
  
  
 0.490
CPS_1007
Putative decarboxylase; Identified by match to protein family HMM PF00282.
  
  
 0.453
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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