Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CPS_2425DSBA-like thioredoxin domain protein; Identified by match to protein family HMM PF01323. (436 aa)    
Predicted Functional Partners:
CPS_2436
Putative glutathione S-transferase; Identified by similarity to GP:3891593; match to protein family HMM PF02798; Belongs to the GST superfamily.
  
    0.654
CPS_3329
Conserved hypothetical protein; Identified by similarity to GP:29541645; match to protein family HMM PF07681.
  
     0.560
CPS_1281
Metallo-beta-lactamase family protien; Identified by match to protein family HMM PF00753.
  
     0.500
CPS_1666
Identified by match to protein family HMM PF00753.
  
     0.495
CPS_2548
Conserved hypothetical protein; Identified by similarity to OMNI:VCA0432.
  
     0.451
CPS_2086
Putative beta-lactamase; Identified by match to protein family HMM PF00144.
  
     0.425
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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