Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_2190 | CPS_4878 | CPS_2190 | CPS_4878 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | 0.901 |
| CPS_2190 | glyA1 | CPS_2190 | CPS_0728 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_2190 | glyA2 | CPS_2190 | CPS_2477 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_2190 | glyA3 | CPS_2190 | CPS_3844 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_2190 | glyA4 | CPS_2190 | CPS_4031 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_2190 | soxA1 | CPS_2190 | CPS_2480 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Sarcosine oxidase, alpha subunit; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372; Belongs to the GcvT family. | 0.923 |
| CPS_2190 | soxB1 | CPS_2190 | CPS_2478 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Sarcosine oxidase, beta subunit; Identified by similarity to SP:P40875; match to protein family HMM TIGR01373. | 0.917 |
| CPS_2190 | soxD1 | CPS_2190 | CPS_2479 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.900 |
| CPS_2190 | soxG1 | CPS_2190 | CPS_2481 | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.900 |
| CPS_4878 | CPS_2190 | CPS_4878 | CPS_2190 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | 0.901 |
| CPS_4878 | glyA1 | CPS_4878 | CPS_0728 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_4878 | glyA2 | CPS_4878 | CPS_2477 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_4878 | glyA3 | CPS_4878 | CPS_3844 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_4878 | glyA4 | CPS_4878 | CPS_4031 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| CPS_4878 | soxA1 | CPS_4878 | CPS_2480 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Sarcosine oxidase, alpha subunit; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372; Belongs to the GcvT family. | 0.923 |
| CPS_4878 | soxB1 | CPS_4878 | CPS_2478 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Sarcosine oxidase, beta subunit; Identified by similarity to SP:P40875; match to protein family HMM TIGR01373. | 0.917 |
| CPS_4878 | soxD1 | CPS_4878 | CPS_2479 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.900 |
| CPS_4878 | soxG1 | CPS_4878 | CPS_2481 | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.900 |
| glyA1 | CPS_2190 | CPS_0728 | CPS_2190 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminotransferase, class V; Identified by similarity to GP:2239081; match to protein family HMM PF00266. | 0.913 |
| glyA1 | CPS_4878 | CPS_0728 | CPS_4878 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminotransferase, class V; Identified by match to protein family HMM PF00266. | 0.913 |
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