Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CPS_1700 | CPS_2629 | Putative membrane protein; Identified by match to protein family HMM PF07690. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.487 |
| CPS_1700 | CPS_4602 | Putative membrane protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein; Identified by similarity to SP:O67300. | 0.438 |
| CPS_2120 | CPS_2629 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.558 |
| CPS_2120 | CPS_3244 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | 0.472 |
| CPS_2120 | CPS_3249 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563. | 0.489 |
| CPS_2120 | CPS_3250 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NS2290. | 0.456 |
| CPS_2120 | CPS_3252 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Capsular polysaccharide biosynthesis protein, homolog; Identified by similarity to GP:6601342. | 0.411 |
| CPS_2120 | CPS_3253 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Putative polysaccharide pyruvyl transferase. | 0.480 |
| CPS_2629 | CPS_1700 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Putative membrane protein; Identified by match to protein family HMM PF07690. | 0.487 |
| CPS_2629 | CPS_2120 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.558 |
| CPS_2629 | CPS_3010 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Conserved hypothetical protein; Identified by similarity to GP:27359990. | 0.532 |
| CPS_2629 | CPS_3244 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | 0.563 |
| CPS_2629 | CPS_3249 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563. | 0.563 |
| CPS_2629 | CPS_3250 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01NS2290. | 0.584 |
| CPS_2629 | CPS_3252 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Capsular polysaccharide biosynthesis protein, homolog; Identified by similarity to GP:6601342. | 0.520 |
| CPS_2629 | CPS_3253 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Putative polysaccharide pyruvyl transferase. | 0.672 |
| CPS_2629 | CPS_4602 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Conserved hypothetical protein; Identified by similarity to SP:O67300. | 0.496 |
| CPS_2629 | CPS_4604 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.573 |
| CPS_3010 | CPS_2629 | Conserved hypothetical protein; Identified by similarity to GP:27359990. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.532 |
| CPS_3010 | CPS_3244 | Conserved hypothetical protein; Identified by similarity to GP:27359990. | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. | 0.527 |
page 1 of 4