Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CPS_2472 | CPS_2641 | Porin; Identified by match to protein family HMM PF00267. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.637 |
| CPS_2472 | CPS_3847 | Porin; Identified by match to protein family HMM PF00267. | Porin; Identified by match to protein family HMM PF00267. | 0.902 |
| CPS_2639 | CPS_2640 | Hypothetical protein; Identified by Glimmer2; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.570 |
| CPS_2639 | CPS_2641 | Hypothetical protein; Identified by Glimmer2; putative. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.570 |
| CPS_2639 | CPS_2642 | Hypothetical protein; Identified by Glimmer2; putative. | Putative lipoprotein. | 0.570 |
| CPS_2640 | CPS_2639 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
| CPS_2640 | CPS_2641 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.871 |
| CPS_2640 | CPS_2642 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Putative lipoprotein. | 0.834 |
| CPS_2641 | CPS_2472 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Porin; Identified by match to protein family HMM PF00267. | 0.637 |
| CPS_2641 | CPS_2639 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
| CPS_2641 | CPS_2640 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.871 |
| CPS_2641 | CPS_2642 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Putative lipoprotein. | 0.972 |
| CPS_2641 | CPS_3571 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Hypothetical protein; Identified by Glimmer2; putative. | 0.484 |
| CPS_2641 | CPS_3847 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Porin; Identified by match to protein family HMM PF00267. | 0.621 |
| CPS_2641 | CPS_4509 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Putative toxin secretion protein; Identified by similarity to SP:P22519. | 0.404 |
| CPS_2641 | CPS_4895 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | Putative ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF04069. | 0.412 |
| CPS_2642 | CPS_2639 | Putative lipoprotein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
| CPS_2642 | CPS_2640 | Putative lipoprotein. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.834 |
| CPS_2642 | CPS_2641 | Putative lipoprotein. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.972 |
| CPS_3571 | CPS_2641 | Hypothetical protein; Identified by Glimmer2; putative. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.484 |
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