node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPS_2945 | polA | CPS_2945 | CPS_4978 | Putative DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.825 |
CPS_2945 | recA | CPS_2945 | CPS_4134 | Putative DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.798 |
CPS_2945 | sbcC | CPS_2945 | CPS_2848 | Putative DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Exonuclease SbcC; Identified by match to protein family HMM TIGR00618. | 0.654 |
CPS_2945 | sbcD | CPS_2945 | CPS_2849 | Putative DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.802 |
CPS_2945 | xni | CPS_2945 | CPS_3538 | Putative DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.708 |
CPS_3886 | CPS_4230 | CPS_3886 | CPS_4230 | ATP-dependent helicase; Identified by similarity to SP:P54394. | Hypothetical protein; Identified by Glimmer2; putative. | 0.404 |
CPS_3886 | CPS_4237 | CPS_3886 | CPS_4237 | ATP-dependent helicase; Identified by similarity to SP:P54394. | RecQ domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614. | 0.468 |
CPS_3886 | polA | CPS_3886 | CPS_4978 | ATP-dependent helicase; Identified by similarity to SP:P54394. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.803 |
CPS_3886 | recA | CPS_3886 | CPS_4134 | ATP-dependent helicase; Identified by similarity to SP:P54394. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.468 |
CPS_3886 | recQ | CPS_3886 | CPS_0083 | ATP-dependent helicase; Identified by similarity to SP:P54394. | ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389. | 0.604 |
CPS_3886 | sbcC | CPS_3886 | CPS_2848 | ATP-dependent helicase; Identified by similarity to SP:P54394. | Exonuclease SbcC; Identified by match to protein family HMM TIGR00618. | 0.408 |
CPS_3886 | sbcD | CPS_3886 | CPS_2849 | ATP-dependent helicase; Identified by similarity to SP:P54394. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.756 |
CPS_3886 | xni | CPS_3886 | CPS_3538 | ATP-dependent helicase; Identified by similarity to SP:P54394. | Exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.545 |
CPS_4230 | CPS_3886 | CPS_4230 | CPS_3886 | Hypothetical protein; Identified by Glimmer2; putative. | ATP-dependent helicase; Identified by similarity to SP:P54394. | 0.404 |
CPS_4230 | dinG | CPS_4230 | CPS_2272 | Hypothetical protein; Identified by Glimmer2; putative. | ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.404 |
CPS_4230 | polA | CPS_4230 | CPS_4978 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.572 |
CPS_4230 | recA | CPS_4230 | CPS_4134 | Hypothetical protein; Identified by Glimmer2; putative. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.456 |
CPS_4230 | sbcC | CPS_4230 | CPS_2848 | Hypothetical protein; Identified by Glimmer2; putative. | Exonuclease SbcC; Identified by match to protein family HMM TIGR00618. | 0.490 |
CPS_4230 | sbcD | CPS_4230 | CPS_2849 | Hypothetical protein; Identified by Glimmer2; putative. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.808 |
CPS_4237 | CPS_3886 | CPS_4237 | CPS_3886 | RecQ domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614. | ATP-dependent helicase; Identified by similarity to SP:P54394. | 0.468 |