Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CPS_0579 | CPS_2913 | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P75880; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.475 |
CPS_0579 | CPS_3015 | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P75880; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P53433; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.925 |
CPS_1723 | CPS_2913 | Conserved hypothetical protein; Identified by similarity to OMNI:VC0957. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.461 |
CPS_2912 | CPS_2913 | Ferredoxin, 4Fe-4S; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.539 |
CPS_2913 | CPS_0579 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P75880; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.475 |
CPS_2913 | CPS_1723 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Conserved hypothetical protein; Identified by similarity to OMNI:VC0957. | 0.461 |
CPS_2913 | CPS_2912 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Ferredoxin, 4Fe-4S; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.539 |
CPS_2913 | CPS_2914 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Conserved hypothetical protein; Identified by similarity to OMNI:SO2297. | 0.520 |
CPS_2913 | CPS_3015 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P53433; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.823 |
CPS_2913 | CPS_3485 | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | Conserved hypothetical protein; Identified by similarity to GP:27361572; match to protein family HMM PF06798. | 0.455 |
CPS_2914 | CPS_2913 | Conserved hypothetical protein; Identified by similarity to OMNI:SO2297. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.520 |
CPS_3015 | CPS_0579 | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P53433; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P75880; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.925 |
CPS_3015 | CPS_2913 | Phosphotyrosine protein phosphatase; Identified by similarity to SP:P53433; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.823 |
CPS_3485 | CPS_2913 | Conserved hypothetical protein; Identified by similarity to GP:27361572; match to protein family HMM PF06798. | Identified by similarity to SP:Q9H479; match to protein family HMM PF03881; Belongs to the fructosamine kinase family. | 0.455 |