Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CPS_2728 | CPS_3038 | Conserved hypothetical protein; Identified by similarity to GP:29608450. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.477 |
CPS_3036 | CPS_3037 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.497 |
CPS_3036 | CPS_3038 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.422 |
CPS_3037 | CPS_3036 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.497 |
CPS_3037 | CPS_3038 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.642 |
CPS_3038 | CPS_2728 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Conserved hypothetical protein; Identified by similarity to GP:29608450. | 0.477 |
CPS_3038 | CPS_3036 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Hypothetical protein; Identified by Glimmer2; putative. | 0.422 |
CPS_3038 | CPS_3037 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Hypothetical protein; Identified by Glimmer2; putative. | 0.642 |
CPS_3038 | CPS_3571 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Hypothetical protein; Identified by Glimmer2; putative. | 0.442 |
CPS_3038 | CPS_4001 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Conserved domain protein; Identified by similarity to GP:4106643; match to protein family HMM PF07676. | 0.403 |
CPS_3038 | CPS_4110 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Hypothetical protein; Identified by Glimmer2; putative. | 0.443 |
CPS_3038 | CPS_4655 | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. | 0.482 |
CPS_3571 | CPS_3038 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.442 |
CPS_4001 | CPS_3038 | Conserved domain protein; Identified by similarity to GP:4106643; match to protein family HMM PF07676. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.403 |
CPS_4110 | CPS_3038 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.443 |
CPS_4655 | CPS_3038 | Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165. | Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches. | 0.482 |