STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_3310Putative phosphonate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (236 aa)    
Predicted Functional Partners:
CPS_3309
Putative phosphonate ABC transporter, periplasmic phosphonate-binding protein; Identified by similarity to SP:P16682; match to protein family HMM TIGR01098.
 
 
 0.997
CPS_3311
Putative phosphonate ABC transporter, permease protein; Identified by similarity to SP:P16683; match to protein family HMM PF00528; match to protein family HMM TIGR01097.
 
 0.993
CPS_1795
ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family.
  
   
 0.662
CPS_1798
ATP-dependent peptidase, M41 family; Identified by similarity to GP:8051696; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF07724; Belongs to the AAA ATPase family.
  
   
 0.657
nosF
Copper ABC transporter, ATP-binding protein; Identified by similarity to SP:P19844; match to protein family HMM PF00005.
  
     0.620
ccmA
Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
     0.535
gcp
O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
     0.516
hutC
Histidine utilization repressor; Identified by similarity to SP:P12380; match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02018.
  
  
 0.513
pstA
Phosphate ABC transporter, permease protein; Identified by similarity to GP:1369911; match to protein family HMM PF00528; match to protein family HMM TIGR00974.
   
  
 0.512
CPS_3932
Identified by similarity to GP:28738; match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
  
  
 0.493
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.