Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPS_3232 | CPS_3465 | CPS_3232 | CPS_3465 | Aminotransferase, class I; Identified by match to protein family HMM PF00155. | Identified by match to protein family HMM PF03553. | 0.497 |
CPS_3464 | CPS_3465 | CPS_3464 | CPS_3465 | EAL domain protein; Identified by match to protein family HMM PF00563. | Identified by match to protein family HMM PF03553. | 0.441 |
CPS_3464 | putP | CPS_3464 | CPS_3463 | EAL domain protein; Identified by match to protein family HMM PF00563. | Proline/sodium symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.469 |
CPS_3465 | CPS_3232 | CPS_3465 | CPS_3232 | Identified by match to protein family HMM PF03553. | Aminotransferase, class I; Identified by match to protein family HMM PF00155. | 0.497 |
CPS_3465 | CPS_3464 | CPS_3465 | CPS_3464 | Identified by match to protein family HMM PF03553. | EAL domain protein; Identified by match to protein family HMM PF00563. | 0.441 |
CPS_3465 | lon | CPS_3465 | CPS_3783 | Identified by match to protein family HMM PF03553. | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.444 |
CPS_3465 | putP | CPS_3465 | CPS_3463 | Identified by match to protein family HMM PF03553. | Proline/sodium symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.425 |
lon | CPS_3465 | CPS_3783 | CPS_3465 | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | Identified by match to protein family HMM PF03553. | 0.444 |
putP | CPS_3464 | CPS_3463 | CPS_3464 | Proline/sodium symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | EAL domain protein; Identified by match to protein family HMM PF00563. | 0.469 |
putP | CPS_3465 | CPS_3463 | CPS_3465 | Proline/sodium symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Identified by match to protein family HMM PF03553. | 0.425 |