CPS_3505 protein (Colwellia psychrerythraea)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

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experimentally determined

Predicted Interactions

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Score

CPS_3505

ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (804 aa)

Predicted Functional Partners:

CPS_3506

0.965

CPS_3507

0.923

CPS_4701

0.858

CPS_4702

0.851

CPS_4415

0.843

CPS_2119

0.835

CPS_2118

0.831

CPS_0774

0.828

CPS_4416

0.826

CPS_0775

0.814

Your Current Organism:

Colwellia psychrerythraea

NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CPS_0774	CPS_0775	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.811
CPS_0774	CPS_2119	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.751
CPS_0774	CPS_3505	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.828
CPS_0774	CPS_3506	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.649
CPS_0774	CPS_4416	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.614
CPS_0774	CPS_4701	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.693
CPS_0775	CPS_0774	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	0.811
CPS_0775	CPS_2118	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.649
CPS_0775	CPS_3505	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.814
CPS_0775	CPS_3507	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit subfamily; Identified by match to protein family HMM TIGR01730.	0.634
CPS_0775	CPS_4415	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.649
CPS_0775	CPS_4702	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.682
CPS_2118	CPS_0775	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.649
CPS_2118	CPS_2119	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.853
CPS_2118	CPS_3505	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.831
CPS_2118	CPS_3506	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.677
CPS_2118	CPS_4416	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.647
CPS_2118	CPS_4701	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.717
CPS_2119	CPS_0774	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730.	0.751
CPS_2119	CPS_2118	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.	0.853

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