Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_3656 | cobC | CPS_3656 | CPS_1142 | Identified by match to protein family HMM PF00300. | cobC protein; Identified by similarity to SP:P21633. | 0.531 |
| CPS_3656 | cobP | CPS_3656 | CPS_3657 | Identified by match to protein family HMM PF00300. | Bifunctional cobalamin biosynthesis protein CobP; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.912 |
| CPS_3656 | cobQ | CPS_3656 | CPS_3655 | Identified by match to protein family HMM PF00300. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.919 |
| CPS_3656 | cobS | CPS_3656 | CPS_3658 | Identified by match to protein family HMM PF00300. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.931 |
| CPS_3656 | cobT | CPS_3656 | CPS_3659 | Identified by match to protein family HMM PF00300. | Putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.923 |
| CPS_4742 | cobB | CPS_4742 | CPS_1147 | Identified by match to protein family HMM PF03186. | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | 0.838 |
| CPS_4742 | cobC | CPS_4742 | CPS_1142 | Identified by match to protein family HMM PF03186. | cobC protein; Identified by similarity to SP:P21633. | 0.978 |
| CPS_4742 | cobD | CPS_4742 | CPS_1143 | Identified by match to protein family HMM PF03186. | Putative cobalamin biosynthesis protein D; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.929 |
| CPS_4742 | cobO1 | CPS_4742 | CPS_1148 | Identified by match to protein family HMM PF03186. | cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.965 |
| CPS_4742 | cobO2 | CPS_4742 | CPS_1164 | Identified by match to protein family HMM PF03186. | cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.964 |
| CPS_4742 | cobP | CPS_4742 | CPS_3657 | Identified by match to protein family HMM PF03186. | Bifunctional cobalamin biosynthesis protein CobP; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.986 |
| CPS_4742 | cobQ | CPS_4742 | CPS_3655 | Identified by match to protein family HMM PF03186. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.981 |
| CPS_4742 | cobS | CPS_4742 | CPS_3658 | Identified by match to protein family HMM PF03186. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.804 |
| CPS_4742 | cobT | CPS_4742 | CPS_3659 | Identified by match to protein family HMM PF03186. | Putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.817 |
| cobB | CPS_4742 | CPS_1147 | CPS_4742 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | Identified by match to protein family HMM PF03186. | 0.838 |
| cobB | cobC | CPS_1147 | CPS_1142 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | cobC protein; Identified by similarity to SP:P21633. | 0.859 |
| cobB | cobD | CPS_1147 | CPS_1143 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | Putative cobalamin biosynthesis protein D; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.875 |
| cobB | cobO1 | CPS_1147 | CPS_1148 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.967 |
| cobB | cobO2 | CPS_1147 | CPS_1164 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. | 0.966 |
| cobB | cobP | CPS_1147 | CPS_3657 | Cobyrinic acid a,c-diamide synthase; Identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379. | Bifunctional cobalamin biosynthesis protein CobP; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. | 0.930 |
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