STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_3812Conserved hypothetical protein; Identified by similarity to OMNI:VC2113. (189 aa)    
Predicted Functional Partners:
CPS_3811
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.798
CPS_2446
Conserved hypothetical protein; Identified by similarity to OMNI:SO2846; match to protein family HMM PF01925.
 
    0.559
CPS_0971
Conserved hypothetical protein TIGR00238; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238.
  
   
 0.552
CPS_3810
Conserved hypothetical protein; Identified by similarity to GP:28807191.
  
    0.538
efp
Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.
  
   
 0.502
CPS_0265
Putative membrane protein; Identified by similarity to OMNI:SO2846; match to protein family HMM PF01925.
 
    0.483
CPS_1006
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.460
CPS_0153
Conserved hypothetical protein; Identified by similarity to SP:P32680.
  
     0.434
CPS_2133
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01ST1194; match to protein family HMM PF08007.
  
     0.432
miaE
tRNA-(MS[2]IO[6]A)-hydroxylase; Identified by similarity to SP:Q08015; match to protein family HMM PF06175.
  
     0.430
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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