STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_3817Monovalent cation/proton antiporter, MnhC/PhaC family subunit; Identified by match to protein family HMM PF00420. (123 aa)    
Predicted Functional Partners:
CPS_3815
Monovalent cation/proton antiporter, MnhE/PhaE family subunit; Identified by match to protein family HMM PF01899.
 
 
 0.999
CPS_3816
Monovalent cation/proton antiporter, MnhD/PhaD family subunit; Identified by match to protein family HMM PF00361.
 
 
 0.999
CPS_3818
Multicomponent K+:H+ antiporter subunit A; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM PF04039.
 
 
 0.999
CPS_3814
Monovalent cation/proton antiporter, MnhF/PhaF family subunit; Identified by match to protein family HMM PF04066.
 
 
 0.998
CPS_3813
Monovalent cation/proton antiporter, MnhG/PhaG family subunit; Identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300.
 
 
 0.997
CPS_1201
Ferredoxin, 4Fe-4S; Identified by match to protein family HMM PF00037.
  
 
 0.597
CPS_3819
Transcriptional regulator, AsnC family; Identified by match to protein family HMM PF01037.
       0.423
CPS_3811
Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.422
CPS_3812
Conserved hypothetical protein; Identified by similarity to OMNI:VC2113.
       0.422
CPS_0761
Putative glutamate synthase, ferredoxin-dependent; Identified by similarity to SP:P55037; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.
      
 0.404
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.