Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_3595 | CPS_4114 | CPS_3595 | CPS_4114 | Identified by match to protein family HMM PF00293. | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | 0.908 |
| CPS_3595 | nadD | CPS_3595 | CPS_1718 | Identified by match to protein family HMM PF00293. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.907 |
| CPS_3595 | nadE | CPS_3595 | CPS_3918 | Identified by match to protein family HMM PF00293. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.907 |
| CPS_3595 | pntA | CPS_3595 | CPS_1783 | Identified by match to protein family HMM PF00293. | NAD(P) transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.900 |
| CPS_3595 | pntB1 | CPS_3595 | CPS_1784 | Identified by match to protein family HMM PF00293. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.900 |
| CPS_3595 | pntB2 | CPS_3595 | CPS_4040 | Identified by match to protein family HMM PF00293. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.900 |
| CPS_3595 | ppnK | CPS_3595 | CPS_3824 | Identified by match to protein family HMM PF00293. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.903 |
| CPS_3595 | sthA | CPS_3595 | CPS_0334 | Identified by match to protein family HMM PF00293. | Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.903 |
| CPS_4114 | CPS_3595 | CPS_4114 | CPS_3595 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | Identified by match to protein family HMM PF00293. | 0.908 |
| CPS_4114 | nadD | CPS_4114 | CPS_1718 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.903 |
| CPS_4114 | nadE | CPS_4114 | CPS_3918 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.900 |
| CPS_4114 | pntA | CPS_4114 | CPS_1783 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | NAD(P) transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.900 |
| CPS_4114 | pntB1 | CPS_4114 | CPS_1784 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.901 |
| CPS_4114 | pntB2 | CPS_4114 | CPS_4040 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.901 |
| CPS_4114 | ppnK | CPS_4114 | CPS_3824 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.902 |
| CPS_4114 | sthA | CPS_4114 | CPS_0334 | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.905 |
| nadD | CPS_3595 | CPS_1718 | CPS_3595 | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Identified by match to protein family HMM PF00293. | 0.907 |
| nadD | CPS_4114 | CPS_1718 | CPS_4114 | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444. | 0.903 |
| nadD | nadE | CPS_1718 | CPS_3918 | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.966 |
| nadD | pntA | CPS_1718 | CPS_1783 | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | NAD(P) transhydrogenase, alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.908 |
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