Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPS_1461 | soxA2 | CPS_1461 | CPS_4034 | Putative oxidoreductase. | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | 0.855 |
| CPS_4030 | soxA2 | CPS_4030 | CPS_4034 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | 0.891 |
| CPS_4030 | soxB1 | CPS_4030 | CPS_2478 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, beta subunit; Identified by similarity to SP:P40875; match to protein family HMM TIGR01373. | 0.583 |
| CPS_4030 | soxB2 | CPS_4030 | CPS_4032 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, beta subunit; Identified by match to protein family HMM TIGR01373. | 0.521 |
| CPS_4030 | soxD1 | CPS_4030 | CPS_2479 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.633 |
| CPS_4030 | soxD2 | CPS_4030 | CPS_4033 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.742 |
| CPS_4030 | soxG1 | CPS_4030 | CPS_2481 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.794 |
| CPS_4030 | soxG2 | CPS_4030 | CPS_4035 | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.760 |
| gcvP1 | gcvP2 | CPS_1276 | CPS_3846 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvP1 | soxA2 | CPS_1276 | CPS_4034 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | 0.967 |
| gcvP1 | soxB1 | CPS_1276 | CPS_2478 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, beta subunit; Identified by similarity to SP:P40875; match to protein family HMM TIGR01373. | 0.910 |
| gcvP1 | soxD1 | CPS_1276 | CPS_2479 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.901 |
| gcvP1 | soxG1 | CPS_1276 | CPS_2481 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.906 |
| gcvP2 | gcvP1 | CPS_3846 | CPS_1276 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvP2 | soxA2 | CPS_3846 | CPS_4034 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | 0.967 |
| gcvP2 | soxB1 | CPS_3846 | CPS_2478 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, beta subunit; Identified by similarity to SP:P40875; match to protein family HMM TIGR01373. | 0.910 |
| gcvP2 | soxD1 | CPS_3846 | CPS_2479 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, delta subunit; Identified by similarity to SP:Q46336; match to protein family HMM PF04267; match to protein family HMM TIGR01374. | 0.901 |
| gcvP2 | soxG1 | CPS_3846 | CPS_2481 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, gamma subunit; Identified by similarity to SP:Q46338; match to protein family HMM PF04268. | 0.906 |
| soxA2 | CPS_1461 | CPS_4034 | CPS_1461 | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | Putative oxidoreductase. | 0.855 |
| soxA2 | CPS_4030 | CPS_4034 | CPS_4030 | Sarcosine oxidase, alpha subunit; Identified by match to protein family HMM PF01571; match to protein family HMM PF07992; match to protein family HMM TIGR01372. | Oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970. | 0.891 |
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