STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_4422Alkaline phosphatase D domain protein; Identified by similarity to SP:P42251. (369 aa)    
Predicted Functional Partners:
CPS_1963
Alkaline phosphatase; Identified by similarity to GP:5020414; match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
  
 
 0.934
CPS_3932
Identified by similarity to GP:28738; match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
  
 
 0.934
CPS_3933
Identified by similarity to GP:28738; match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
  
 
 0.934
folE1
GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.
    
 0.910
folE2
GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.
    
 0.910
folE3
GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063.
    
 0.910
folX
D-erythro-7,8-dihydroneopterin triphosphate epimerase; Identified by similarity to SP:P80449; match to protein family HMM PF02152; match to protein family HMM TIGR00526.
     
 0.909
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.909
CPS_2933
Putative 6-pyruvoyl tetrahydropterin synthase; Identified by match to protein family HMM PF01242.
     
  0.900
folE2-2
Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
     
  0.900
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.