STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgtEMagnesium transporter; Acts as a magnesium transporter. (452 aa)    
Predicted Functional Partners:
CPS_4550
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
ptsN
PTS system, nitrogen regulatory IIA component; Identified by similarity to SP:P31222; match to protein family HMM PF00359.
 
   
 0.492
ptsO
Phosphocarrier protein NPr; Identified by similarity to SP:P33996; match to protein family HMM PF00381; match to protein family HMM TIGR01003.
     
 0.471
CPS_1761
Putative glutathione-regulated potassium-efflux system protein KefB; Identified by similarity to SP:P45522; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.467
CPS_4548
Hypothetical protein; Identified by Glimmer2; putative.
       0.443
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.439
CPS_1916
Copper-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
  
  
 0.436
CPS_4537
Putative sodium/calcium exchanger protein; Identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367.
 
 
   0.426
uppP
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
     0.407
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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