STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_4688Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR00273. (492 aa)    
Predicted Functional Partners:
CPS_4689
Cysteine-rich domain protein; Identified by similarity to GP:27358775; match to protein family HMM PF02754.
 
 0.999
CPS_4687
Conserved hypothetical protein; Identified by similarity to GP:27358777; match to protein family HMM PF02589.
 
 
 0.996
CPS_4686
Oxidoreductase, FAD-binding/iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02913.
 
 
 0.955
lldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.895
CPS_2998
FAD binding protein; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
  
 
 0.816
CPS_4016
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754.
  
 
 0.684
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.592
CPS_0178
Oxidoreductase, NAD-binding; Identified by match to protein family HMM PF00175.
  
   0.461
CPS_2079
Pyruvate ferredoxin/flavodoxin oxidoreductase; Identified by match to protein family HMM PF01558; match to protein family HMM PF02775.
  
  
 0.409
pdhR
Pyruvate dehydrogenase complex repressor; Identified by similarity to SP:P06957; match to protein family HMM PF00392; match to protein family HMM PF07729.
 
   
 0.407
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.