STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosFCopper ABC transporter, ATP-binding protein; Identified by similarity to SP:P19844; match to protein family HMM PF00005. (304 aa)    
Predicted Functional Partners:
nosY
Copper ABC transporter, permease protein; Identified by similarity to SP:P19845.
 
 0.986
nosD
Copper ABC transporter, periplasmic copper-binding protein; Identified by similarity to SP:P19843; match to protein family HMM PF05048.
 
 0.970
nosL
Protein disulfide isomerase NosL.
 
 
 0.967
CPS_1248
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
  
 0.927
CPS_1014
iron(III) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.921
CPS_2640
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
   
0.912
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.911
potG
Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.905
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
 
 0.859
CPS_4731
Putative transcriptional regulator NosR; Identified by similarity to SP:Q00790; match to protein family HMM PF04205.
 
  
 0.850
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.