STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPS_4855Conserved hypothetical protein; This gene assignment is based partly on a multiple alignment of the best pairwise matches; identified by similarity to OMNI:SO4594. (145 aa)    
Predicted Functional Partners:
CPS_4854
Hypothetical protein; Identified by Glimmer2; putative.
       0.566
CPS_4856
Putative cation efflux protein.
       0.500
cusB
Cation efflux system protein CusB; Identified by similarity to SP:P77239; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.500
cusA
Cation efflux system protein CusA; Identified by similarity to SP:P38054; match to protein family HMM PF00873; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.500
CPS_4859
Putative cation efflux protein.
       0.491
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.