STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggt2Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066. (619 aa)    
Predicted Functional Partners:
ggt1
Gamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066.
  
  
 
0.920
CPS_0170
Putative glutathione S-transferase; Identified by match to protein family HMM PF02798.
  
  
 0.915
gshB
Glutathione synthetase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.915
CPS_0805
Putative glutathione S-transferase; Identified by similarity to SP:Q9VG96; match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.
  
  
 0.914
CPS_2006
Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
     
 0.914
gor
Glutathione reductase; Identified by similarity to SP:P06715; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01421.
     
 0.914
pepA
Cytosol aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.909
CPS_4956
Identified by match to protein family HMM PF00883; Belongs to the peptidase M17 family.
     
 0.909
pepD
Aminoacyl-histidine dipeptidase; Identified by similarity to SP:P15288; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893.
     
 0.908
gshA
Glutamate--cysteine ligase; Identified by match to protein family HMM PF04262; match to protein family HMM TIGR01434; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
    
  0.907
Your Current Organism:
Colwellia psychrerythraea
NCBI taxonomy Id: 167879
Other names: C. psychrerythraea 34H, Colwellia psychrerythraea 34H, Colwellia psychrerythraea str. 34H, Colwellia psychrerythraea strain 34H, Colwellia sp. 34H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.