STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_11258Predicted Zn-dependent peptidase. (440 aa)    
Predicted Functional Partners:
ATC1_11259
Predicted Zn-dependent peptidase.
    
0.985
ATC1_11277
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 
 0.979
ATC1_1374
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
   
 
 0.977
ATC1_1375
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit.
   
 
 0.909
ATC1_1222
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
 
 0.861
GAP41312.1
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.828
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.802
ATC1_13209
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
  
 0.797
atpH
ATP synthase, F0 subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family.
   
 
 0.791
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.784
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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