STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_12415Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain. (102 aa)    
Predicted Functional Partners:
ATC1_13572
Dihydroorotase.
 
 0.984
ATC1_12395
Dihydroorotase, multifunctional complex type.
 
 0.929
ATC1_13487
Dihydropyrimidinase.
  
 0.917
ATC1_13343
Hypothetical protein.
  
 
 0.883
pyrR
Pyrimidine operon attenuation protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
  
 
 0.852
GAP41419.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.840
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
  
 0.784
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.766
pyrD
Dihydroorotate dehydrogenase (subfamily 1) family protein; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.756
ATC1_13506
Dihydroorotate dehydrogenase (subfamily 1) family protein; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.756
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.