STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41036.1Predicted Fe-Mo cluster-binding protein, NifX family. (123 aa)    
Predicted Functional Partners:
GAP41035.1
Predicted DNA-binding protein, UPF0251 family; Belongs to the UPF0251 family.
  
 0.987
GAP41037.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
 0.953
GAP41038.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
  
 0.953
GAP41041.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
     0.930
GAP41039.1
Metal-dependent hydrolase, beta-lactamase superfamily II.
 
     0.929
GAP41034.1
Hypothetical protein.
 
     0.876
GAP41040.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.778
GAP41042.1
Hypothetical protein.
 
     0.564
ATC1_12168
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.469
ATC1_13999
Rubrerythrin.
  
     0.463
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.