STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41296.1Metal-sulfur cluster biosynthetic enzyme. (115 aa)    
Predicted Functional Partners:
ATC1_13243
SUF system FeS assembly protein, NifU family.
  
    0.709
GAP41295.1
Protein containing helicase conserved C-terminal domain.
       0.636
GAP41628.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
    
 0.582
ATC1_1266
Serine acetyltransferase.
    
 0.522
GAP41616.1
Glycine cleavage system T protein.
    
 0.522
ATC1_13248
FeS assembly ATPase SufC.
 
  
 0.479
GAP41048.1
NADPH-dependent 2,4-dienoyl-CoA reductase; Belongs to the sulfur carrier protein TusA family.
    
  0.451
ATC1_12517
Cysteine synthase.
    
  0.440
GAP41643.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
  0.440
GAP41270.1
Ferredoxin.
    
  0.411
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.