STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41297.1Pyruvate/oxaloacetate carboxyltransferase. (493 aa)    
Predicted Functional Partners:
ATC1_1164
Biotin-requiring enzyme.
 
 
 0.975
ATC1_1165
Sodium ion-translocating decarboxylase, beta subunit.
 
 
 0.975
ATC1_12168
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.938
GAP41448.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.879
GAP41693.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.870
GAP41623.1
Aldehyde dehydrogenase, iron-sulfur subunit.
    
 0.856
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.825
ATC1_13309
Malic enzyme.
     
 0.813
GAP41279.1
Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.811
GAP41101.1
Acetolactate synthase, large subunit.
     
 0.793
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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