STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41415.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (298 aa)    
Predicted Functional Partners:
GAP41412.1
Nucleoside-binding protein.
 
 
  0.970
GAP41413.1
Nucleoside ABC transporter ATP-binding protein.
 
  0.958
GAP41712.1
Basic membrane lipoprotein Med, periplasmic binding protein (PBP1-ABC) superfamily.
 
 
  0.945
GAP41414.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.935
GAP41593.1
Basic membrane lipoprotein Med, periplasmic binding protein (PBP1-ABC) superfamily.
 
 
  0.882
GAP41655.1
Basic membrane lipoprotein Med, periplasmic binding protein (PBP1-ABC) superfamily.
 
 
  0.869
GAP41657.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.862
GAP41416.1
ADP-ribosylglycohydrolase.
 
     0.839
ATC1_13541
Nucleoside-binding protein.
 
 
  0.817
GAP41866.1
Nucleoside ABC transporter ATP-binding protein.
 
  0.805
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.