STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41698.1ABC-type sugar transport system, permease component. (277 aa)    
Predicted Functional Partners:
GAP41267.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.976
GAP41696.1
ABC-type glycerol-3-phosphate transport system, permease component.
  0.958
GAP41697.1
ABC-type glycerol-3-phosphate transport system, periplasmic component.
  0.946
ATC1_12421
ABC-type glycerol-3-phosphate transport system, permease component.
  0.941
GAP41026.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.940
ATC1_13133
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.930
GAP41462.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.912
ATC1_13424
ABC-type glycerol-3-phosphate transport system, permease component.
 
  0.905
GAP41368.1
ABC-type glycerol-3-phosphate transport system, permease component.
 
  0.904
ATC1_13214
ABC-type glycerol-3-phosphate transport system, permease component.
 
  0.904
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.