STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41708.1Mannose-6-phosphate isomerase, cupin superfamily. (113 aa)    
Predicted Functional Partners:
ATC1_13796
Mannose-1-phosphate guanylyltransferase.
  
  0.984
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.890
GAP41068.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP.
  
 
 0.845
ATC1_1329
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.845
GAP41401.1
Sugar kinase of the NBD/HSP70 family.
    
 0.784
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
  0.782
ATC1_12511
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
    
  0.767
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.751
GAP41238.1
6-phosphogluconolactonase.
     
 0.751
ATC1_1159
Dihydropteroate synthase.
    
  0.737
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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