STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP41843.1Predicted dehydrogenase. (727 aa)    
Predicted Functional Partners:
GAP41844.1
Heparinase II/III-like protein.
 
  
 0.954
GAP41693.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.944
ATC1_12168
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
 0.902
ATC1_13727
Aldo/keto reductase, related to diketogulonate reductase.
  
 
 0.887
GAP41845.1
Glycosyltransferase.
 
    0.855
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.826
ATC1_13636
Threonine dehydrogenase.
 
 
 0.807
ATC1_12492
Threonine dehydrogenase.
 
 
 0.772
GAP41510.1
pimeloyl-ACP methyl ester carboxylesterase.
  
 0.771
ATC1_13165
pimeloyl-ACP methyl ester carboxylesterase.
  
 0.771
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.