STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_13270Haloacid dehalogenase superfamily, subfamily IA, variant 1. (247 aa)    
Predicted Functional Partners:
GAP41732.1
Riboflavin kinase; Belongs to the ribF family.
  
 
 0.811
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.798
GAP41617.1
Uridine kinase.
  
 
  0.759
ATC1_11253
Maltodextrin phosphorylase.
  
 
 0.755
ATC1_13573
MazG nucleotide pyrophosphohydrolase domain.
  
 
  0.755
ATC1_11238
Glucose-1-phosphate adenylyltransferase.
   
 
  0.731
ATC1_11110
Sugar kinase of the NBD/HSP70 family.
   
 
  0.612
GAP41528.1
PAP2 superfamily.
 
  
 0.536
ATC1_1227
Sugar kinase of the NBD/HSP70 family.
   
 
  0.522
ATC1_1283
Sugar kinase of the NBD/HSP70 family.
   
 
  0.522
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.