STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_13311Putative selenate reductase, YgfK subunit. (995 aa)    
Predicted Functional Partners:
ATC1_1374
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 0.998
ATC1_1375
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit.
  
 0.995
ATC1_12168
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 0.993
GAP41312.1
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 0.987
ATC1_11277
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 0.986
GAP41537.1
NADH:ubiquinone oxidoreductase subunit 1.
  
 0.976
ATC1_12199
Selenium-dependent xanthine dehydrogenase.
 
 
 0.973
GAP41313.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 0.969
ATC1_11278
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
 
 0.965
ATC1_1222
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
 0.960
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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