STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_13490NADH-Ubiquinone/plastoquinone (complex I), various chains. (467 aa)    
Predicted Functional Partners:
GAP41535.1
Ni,Fe-hydrogenase III component G.
 
 0.990
GAP41531.1
Proton-translocating NADH-quinone oxidoreductase, chain L.
 
0.970
ATC1_11277
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.943
GAP41534.1
NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family.
 
 
 0.943
ATC1_11278
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.906
GAP41536.1
Ni,Fe-hydrogenase III large subunit.
 
 
 0.903
ATC1_1374
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
    
 0.879
GAP41312.1
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
    
 0.853
GAP41537.1
NADH:ubiquinone oxidoreductase subunit 1.
 
  
 0.837
ATC1_13311
Putative selenate reductase, YgfK subunit.
  
 0.820
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.