STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_13615Galactose mutarotase. (324 aa)    
Predicted Functional Partners:
ATC1_12287
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.956
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
 
 0.897
ATC1_1227
Sugar kinase of the NBD/HSP70 family.
    
  0.744
ATC1_1283
Sugar kinase of the NBD/HSP70 family.
    
  0.744
ATC1_13279
Hypothetical protein.
 
     0.516
ATC1_12451
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.465
ATC1_11263
UDP-galactose 4-epimerase.
  
 
 0.461
ATC1_13574
Hypothetical protein.
  
     0.453
ATC1_13761
Hypothetical protein.
  
     0.438
GAP41395.1
Glyceraldehyde 3-phosphate dehydrogenase.
 
   
 0.432
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.