STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATC1_13656Hypothetical protein. (225 aa)    
Predicted Functional Partners:
ATC1_13657
Hypothetical protein.
 
     0.882
ATC1_13908
Replication restart DNA helicase PriA.
  
     0.771
ATC1_13905
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.763
ATC1_13845
Protein containing helicase conserved C-terminal domain.
  
     0.718
ATC1_13160
Hypothetical protein.
  
     0.709
ATC1_13829
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.703
ATC1_13441
ABC-type transport system.
  
     0.698
GAP41021.1
Polymer-forming cytoskeletal.
  
     0.672
ATC1_13833
Bacterial regulatory proteins, luxR family.
  
     0.652
ATC1_12172
Protein containing leucine rich repeat.
  
     0.606
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.