STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucI-2L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (594 aa)    
Predicted Functional Partners:
ATC1_13719
Sugar (pentulose/hexulose) kinase.
 
 
  0.933
ATC1_12501
L-fucose isomerase.
  
  
 
0.657
ATC1_13720
Transcriptional regulator, LacI family.
  
    0.584
ATC1_13723
ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain.
 
     0.556
ATC1_13724
L-fucose isomerase; Belongs to the RbsD / FucU family.
 
   
 0.485
ATC1_13722
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.429
Your Current Organism:
Flexilinea flocculi
NCBI taxonomy Id: 1678840
Other names: Anaerolineae bacterium TC1, CGMCC 1.5202, F. flocculi, Flexilinea flocculi Sun et al. 2016, JCM 30897, strain TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.