STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP43711.1Protein containing Por secretion system C-terminal sorting domain. (268 aa)    
Predicted Functional Partners:
GAP43106.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.772
GAP42504.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.772
GAP42503.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.771
GAP45171.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.744
GAP42201.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.722
GAP43850.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.719
GAP42400.1
Protein containing PKD repeat.
  
     0.701
GAP42203.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.693
GAP43112.1
Protein containing response regulator receiver domain.
  
     0.691
GAP42401.1
Protein containing PKD repeat.
  
     0.673
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.