STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP44010.1IgA Peptidase M64. (444 aa)    
Predicted Functional Partners:
GAP42588.1
RNase adaptor protein for sRNA GlmZ degradation.
 
  
  0.731
GAP42174.1
Dipeptide/tripeptide permease.
  
     0.664
GAP43589.1
CubicO group peptidase, beta-lactamase class C family.
  
 
  0.629
GAP43282.1
Dipeptidase.
  
     0.625
GAP42614.1
Serine protease, subtilisin family.
     
 0.593
GAP42747.1
Subtilase family.
     
 0.593
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.499
GAP44012.1
TIGR00730 family protein; Belongs to the LOG family.
       0.499
TBC1_1165
Dipeptidase.
  
     0.492
GAP44303.1
Aminopeptidase C.
  
     0.477
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.