STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmSGlucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (612 aa)    
Predicted Functional Partners:
TBC1_1142
glycine/D-amino acid oxidase.
    
 0.853
purL
Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
 0.850
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.832
GAP44426.1
UDP-N-acetylglucosamine diphosphorylase.
 
  
 0.763
GAP43168.1
NAD(P)H-flavin reductase.
  
 
 0.735
GAP44637.1
Phosphoglucosamine mutase.
  
 
 0.723
GAP43508.1
Glutamine synthetase.
  
 
 0.719
GAP44903.1
Protein containing 4Fe-4S dicluster domain.
  
 
  0.710
GAP44847.1
Hypothetical protein.
  
 0.707
GAP42460.1
Hypothetical protein.
  
 
 0.704
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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