STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP42507.1Thioredoxin-disulfide reductase. (314 aa)    
Predicted Functional Partners:
GAP43064.1
Thioredoxin; Belongs to the thioredoxin family.
 0.979
TBC1_1142
glycine/D-amino acid oxidase.
  
 
 0.884
selD
Selenium donor protein; Synthesizes selenophosphate from selenide and ATP. Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.829
GAP43173.1
Thioredoxin; Belongs to the thioredoxin family.
 0.820
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.810
GAP42645.1
Putative selenate reductase, YgfK subunit.
  
 
 0.800
GAP43172.1
Thioredoxin.
 
 0.793
GAP44903.1
Protein containing 4Fe-4S dicluster domain.
  
 
 0.778
GAP44534.1
Thioredoxin.
  
 0.755
GAP43641.1
Alkyl hydroperoxide reductase subunit AhpC; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.745
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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