STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP42694.1Protein containing DRTGG domain. (111 aa)    
Predicted Functional Partners:
GAP42693.1
Iron only hydrogenase large subunit, C-terminal domain.
     0.977
GAP42692.1
Ser/Thr protein kinase.
 
     0.945
GAP42695.1
Protein containing PHP domain.
 
     0.944
GAP42696.1
Histidine kinase.
 
     0.944
GAP42691.1
Protein containing DRTGG domain.
 
     0.941
GAP42697.1
(2Fe-2S) ferredoxin.
 
     0.925
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.733
GAP42911.1
IMP dehydrogenase/.
    
 0.732
GAP42698.1
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
     0.722
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.671
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.