Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAP43320.1 | GAP44400.1 | TBC1_111473 | TBC1_12205 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.480 |
| GAP43320.1 | def | TBC1_111473 | TBC1_112303 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.646 |
| GAP44399.1 | GAP44400.1 | TBC1_12204 | TBC1_12205 | Outer membrane protein beta-barrel domain; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Hypothetical protein. | 0.566 |
| GAP44399.1 | pdxH | TBC1_12204 | TBC1_12206 | Outer membrane protein beta-barrel domain; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.413 |
| GAP44400.1 | GAP43320.1 | TBC1_12205 | TBC1_111473 | Hypothetical protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.480 |
| GAP44400.1 | GAP44399.1 | TBC1_12205 | TBC1_12204 | Hypothetical protein. | Outer membrane protein beta-barrel domain; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.566 |
| GAP44400.1 | TBC1_1282 | TBC1_12205 | TBC1_1282 | Hypothetical protein. | Hypothetical protein. | 0.457 |
| GAP44400.1 | def | TBC1_12205 | TBC1_112303 | Hypothetical protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.913 |
| GAP44400.1 | pdxH | TBC1_12205 | TBC1_12206 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.546 |
| TBC1_1282 | GAP44400.1 | TBC1_1282 | TBC1_12205 | Hypothetical protein. | Hypothetical protein. | 0.457 |
| def | GAP43320.1 | TBC1_112303 | TBC1_111473 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.646 |
| def | GAP44400.1 | TBC1_112303 | TBC1_12205 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.913 |
| pdxH | GAP44399.1 | TBC1_12206 | TBC1_12204 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Outer membrane protein beta-barrel domain; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.413 |
| pdxH | GAP44400.1 | TBC1_12206 | TBC1_12205 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Hypothetical protein. | 0.546 |