STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP44582.1Protein containing thrombospondin type 3 repeat. (786 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.651
GAP43144.1
Amidohydrolase, PncC family; Belongs to the CinA family.
    
  0.651
GAP44900.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
   0.614
GAP42911.1
IMP dehydrogenase/.
    
  0.591
GAP43039.1
Protein containing WD40-like beta propeller repeat.
 
  0.548
GAP43634.1
Protein containing Por secretion system C-terminal sorting domain.
   
 
  0.546
GAP44584.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
   
   0.546
GAP44583.1
Hypothetical protein.
       0.504
GAP43630.1
Periplasmic chaperone for outer membrane proteins Skp.
 
   0.478
GAP43862.1
Protein containing WD40-like beta propeller repeat.
  
  0.473
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.