STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP44690.1Protein containing Por secretion system C-terminal sorting domain. (705 aa)    
Predicted Functional Partners:
GAP42246.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.747
GAP43498.1
Hypothetical protein.
  
     0.740
TBC1_1230
Protein containing Por secretion system C-terminal sorting domain.
  
     0.730
GAP42201.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.728
GAP42400.1
Protein containing PKD repeat.
  
     0.726
GAP42743.1
Protein containing cleaved adhesin domain.
  
     0.710
GAP43123.1
Chain length determinant protein.
  
     0.698
GAP42202.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.698
GAP45171.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.696
GAP43851.1
Protein containing Por secretion system C-terminal sorting domain.
  
     0.691
Your Current Organism:
Lentimicrobium saccharophilum
NCBI taxonomy Id: 1678841
Other names: Bacteroidales bacterium TBC1, DSM 100618, JCM 30898, L. saccharophilum, Lentimicrobium saccharophilum Sun et al. 2016, strain TBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.