STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (589 aa)    
Predicted Functional Partners:
fucU
L-fucose mutarotase; Involved in the anomeric conversion of L-fucose.
 
  
 0.952
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
 
 
 0.906
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
  0.687
fucA
L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
  
 
 0.607
AC062_0545
Fucose permease.
 
  
 0.587
AC062_0087
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
  0.474
AC062_0551
L-fucose operon activator.
       0.436
Your Current Organism:
Pasteurellaceae bacterium NI1060
NCBI taxonomy Id: 1679001
Other names: P. bacterium NI1060
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