Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AC062_0087 | fucI | AC062_0087 | AC062_0550 | Fructokinase; Belongs to the carbohydrate kinase PfkB family. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.474 |
AC062_0545 | fucA | AC062_0545 | AC062_0546 | Fucose permease. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.638 |
AC062_0545 | fucI | AC062_0545 | AC062_0550 | Fucose permease. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.587 |
AC062_0545 | fucK | AC062_0545 | AC062_0548 | Fucose permease. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.650 |
AC062_0545 | fucU | AC062_0545 | AC062_0547 | Fucose permease. | L-fucose mutarotase; Involved in the anomeric conversion of L-fucose. | 0.608 |
AC062_0551 | fucI | AC062_0551 | AC062_0550 | L-fucose operon activator. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.436 |
fucA | AC062_0545 | AC062_0546 | AC062_0545 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | Fucose permease. | 0.638 |
fucA | fucI | AC062_0546 | AC062_0550 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.607 |
fucA | fucK | AC062_0546 | AC062_0548 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.886 |
fucA | fucU | AC062_0546 | AC062_0547 | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | L-fucose mutarotase; Involved in the anomeric conversion of L-fucose. | 0.777 |
fucI | AC062_0087 | AC062_0550 | AC062_0087 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Fructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.474 |
fucI | AC062_0545 | AC062_0550 | AC062_0545 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Fucose permease. | 0.587 |
fucI | AC062_0551 | AC062_0550 | AC062_0551 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fucose operon activator. | 0.436 |
fucI | fucA | AC062_0550 | AC062_0546 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.607 |
fucI | fucK | AC062_0550 | AC062_0548 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | 0.906 |
fucI | fucU | AC062_0550 | AC062_0547 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-fucose mutarotase; Involved in the anomeric conversion of L-fucose. | 0.952 |
fucI | glpK | AC062_0550 | AC062_0900 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.687 |
fucK | AC062_0545 | AC062_0548 | AC062_0545 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | Fucose permease. | 0.650 |
fucK | fucA | AC062_0548 | AC062_0546 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | L-fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.886 |
fucK | fucI | AC062_0548 | AC062_0550 | L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.906 |
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